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Research & Formal Writing

A collection of formal papers, proofs, and research notes spanning mathematics, computation, and the intersections between them.

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Algorithms 2026 10.5281/zenodo.18713449
New

TreeKernelSum: Fast Approximate All-Pairs Kernel Summation on Weighted Trees

Addresses the all-pairs kernel summation problem on weighted trees — computing, for every node, a kernel-weighted sum over all other nodes. Using centroid decomposition and a sum-of-exponentials (SOE) approximation, the algorithm runs in O(r n log n) time, achieving a 972× speedup over the naïve O(n²) baseline at n = 50,000 nodes. Supports Gaussian, Ornstein-Uhlenbeck, Matérn, and inverse multiquadric kernels. Validated on real phylogenetic datasets spanning 5,000+ mammalian species, achieving R² = 0.955 in Nadaraya-Watson body mass prediction. Scales to 1 million nodes in approximately 12 seconds.

Number Theory · Algorithms 2026 10.5281/zenodo.18716922
New

Longest Increasing Subsequences of Collatz Trajectories: A Null Model Decomposition

Uses the longest increasing subsequence (LIS) as a pseudorandomness metric for Collatz trajectories. The mean LIS-to-trajectory ratio is 0.567 for starting values up to 106 — substantially below the 0.812 ratio observed in random sequences of comparable length. Value shuffling restores the ratio to ~0.813, isolating temporal ordering as the driver of the deviation. A hierarchical null model analysis attributes roughly one-third of the disparity to the 31.6% up-step fraction, with the descending suffix responsible for a further reduction. The remaining unexplained variance of ~0.05 persists across generalized 3n+b variants, pointing to deeper structural geometry in Collatz dynamics.

Number Theory 2025 10.5281/zenodo.15738443
Published

Unified p-Adic Bounds and Computation for the Erdős–Moser Equation

A Mahler-Interpolation Framework and Exhaustive Computational Survey

Introduces a closed-form p-adic valuation formula for odd-prime moduli and a Mahler-interpolation lemma for even exponents, together forming a unified framework for the p-adic valuations of power sums Sk(m). Computational verification finds no counterexamples for odd primes 3 ≤ p < 200 with even exponents 2 ≤ k ≤ 20. An exhaustive survey of the Erdős–Moser ratio over 2 ≤ m ≤ 2000 and 2 ≤ k ≤ 12 identifies no solutions beyond the classical case (m, k) = (3, 1). Includes two Python validation scripts and a full PDF manuscript.

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What research is published here?

Three papers across algorithms and number theory. Two 2026 preprints: TreeKernelSum, which derives an O(r n log n) algorithm for all-pairs kernel summation on weighted trees using centroid decomposition; and a null-model analysis of longest increasing subsequences in Collatz trajectories quantifying structural deviation from random sequences. The 2025 paper establishes unified p-adic valuation bounds for the Erdős–Moser equation via Mahler interpolation. All papers include code and are archived on Zenodo with DOIs.

Who writes these papers?

Mark Short, an independent developer working under Seveneves. The work is solo: proofs, implementations, and validation scripts authored by one person. Papers are self-published on Zenodo under open licenses (MIT or CC-BY-4.0) with no institutional affiliation.

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